Publications
The following are publications by Dr. Suprateek Kundu, organized by year. For additional details, please visit Google Scholar.
+= advisee, * = corresponding author
2025
Peer-Reviewed Publications: Collaborative
Pirhoushiaran, M., Walker-Charles, K., Yao, T.-H., Putluri, S., Patel, N., Wang, D.H., Wang, I., Arjuna, S., Dono, A., Bueno-Alvarez, A., Nguyen, S., Balar, A., Huse, J.T., Kundu, S., Esquenazi, Y., Patel, C.B., Prabhu, S., Lang, F.F., and Ballester, L.Y. (2025). Exploring CSF MicroRNA Signatures as Diagnostic Biomarkers in Adult-type Diffuse Gliomas. Accepted in Non-coding RNA Research.
Walker, C.M., Maldonado, M.G., Jacobsen, M.C., Kundu, S., Underwood, M.L., Yung, J.P., Reed, B.J., Jaffray, D., Stafford, J., Hicks, M.E., Chung, C., and Venkatesan, A.M. (2025). Initial Experience with Remote MRI Scanning Support in an Oncology Focused Practice: Opportunities for Expanded Access to Radiology Care. Accepted in Journal of Applied Clinical Medical Physics.
Zaveri, S., Chen, J.H., Meas, S., Yang, Z., Kundu, S., and Lucci, A. (2025). Primary Tumor Surgery in Patients with de novo Stage IV Breast Cancer: Is there an Optimal Subgroup for Locoregional Therapy? Accepted in American Journal of Surgery.
Corrigan, K., Holliday, E., Nyugen, S., Kundu, S., Reinhardt, A., Smith, L., Das, P., and You, Y. (2025). Prospective evaluation of pelvic radiation among patients with young-onset rectal cancer: Impact on patient-reported outcomes. Accepted in Colorectal Cancer.
MacDonald, L., Choi, H., Kang, H.C., Diaz De Leon, A., Kundu, S., Qiao, W., Li, Z., Inguillo, I.A., Maharjan, A., Gregg, J.R., and Ward, J.F. (2025). MRI-US Volume Discrepancy as a Predictor of Targeted Biopsy Performance. Accepted in JU OpenPlus.
Lam, K., Ozkizilkaya, H.I., Milton, D.R., Dono, A., Liu, Y., Kundu, S., Kumar, V.A., Johnson, J., Esquenazi, Y., Patel, C.B., and Ballester, L.Y. (2025). Molecular alterations in IDH-mutant astrocytoma: A multi-institutional retrospective study. Neuro-Oncology Advances, 7(1), vdaf088. https://doi.org/10.1093/noajnl/vdaf088
Lin, T., Mori, L., Batra, A., Chakraborty, N., and Kundu, S. (2025). Utilization of Breathwork Meditation in Improving Wellness in Trainees of Speech-Language Pathology: A Prospective Cohort Study. Accepted in Perspectives of the ASHA Special Interest Groups.
Amer, A., Khose, S., Pokhylevych, H., Alhasan, H., Calle, S., Liu, H., Kundu, S., and Johnson, J.M. (2025). Dynamic Contrast Enhancement Processing Comparison for Determining True Progression from Pseudoprogression in High Grade Glioma. Journal of Computer Assisted Tomography, 49(4):65661. https://doi.org/10.1097/RCT.0000000000001716
Lange, S., Idel, D., Reinhardt, A., Labbate, C., Adibi, M., Kundu, S., and Matin, S. (2025). Expert consensus of variables that impact endoscopic management of upper tract urothelial carcinoma: Development of the Endometry Score. Journal of Urology, 213(4):46774.
Manuscript with Invited Revision
- Ming, J., and Kundu, S. (2025). Flexible Bayesian Support Vector Machines for Brain Network-based Classification. Neuroinformatics*.
Submitted Manuscripts
Ma*, X., and Kundu, S. (2025). A Unified Sparse Learning Framework for Lipschitz Loss Functions with Measurement Errors.
Drexler, M., Risk, B., Lah, J., Kundu, S., and Qiu, D. (2025). Deep Learning based Joint and Individual Variance Explained (DeepJIVE) for multimodal data analysis.
Fu, J., Kundu, S., and Vannucci, M. (2025). A Bayesian Latent-Scale Approach for High-dimensional Network Mediation Models.
Reinhardt, A., Nikzad, N., Park, P.C., Hollis, R.J., Jacobson, G., Roach, M.A., Beretta, L., Jalal, P.K., Fuentes, D., Koay, E., and Kundu, S. (2025). Heterogeneous Image-based Risk Prediction Using Distributional Data Analysis.
Manuscripts Under Preparation
McCullum, L., Hwang, K., Kundu, S., Subashi, E., Fuller, C., and Stafford, J. (2025). Conventional Versus Synthetic MR Generated Contrast-Weighted MRI Images: A Multi-Vendor Contrast Distortion Analysis.
Holliday, E., Yao, T.H., and Kundu, S. (2025). Post-Radiation Vaginal Estrogen Prescriptions for Women with Early Onset Rectal Cancer.
Reinhardt, A.E., and Kundu, S. (2025). Voxel-level Neuroimaging Data Harmonization via Tensors.
Li, W., Long, Q., and Kundu, S. (2025). Scalar-on-Function Prediction Using Noisy fMRI Data.
Chakraborty, M., Ha, M.J., Ma, X., and Kundu, S. (2025). Longitudinal Bayesian Tensor Response Regression for Mapping Genetic Signatures Associated with Brain Structural Changes.
2024
Peer-Reviewed Publications: Collaborative
Woodland, M., Castelo, A., Al Taie, M., Albuquerque, J., Silva, M., Eltaher, M., Mohn, F., Shieh, A., Kundu, S., Yung, J.P., Patel, A.B., and Brock, K.K. (2024). Feature Extraction for Generative Medical Imaging Evaluation: New Evidence Against an Evolving Trend. In: Linguraru, M.G., et al. Medical Image Computing and Computer Assisted Intervention (MICCAI 2024). Lecture Notes in Computer Science, vol 15012. Springer, Cham. https://doi.org/10.1007/978-3-031-72390-2_9
Kiani, S., Eggebeen, J., Al-Gibbawi, M., Smith, P., Preiser, T., Kundu, S., Zheng, Z., Bhatia, N.K., Shah, A.D., Westerman, S.B., De Lurgio, D.B., Tompkins, C.M., Patel, A.M., El-Chami, M.F., Merchant, F.M., and Lloyd, M.S. (2024). Costs, efficiency, and patient-reported outcomes associated with suture-mediated percutaneous closure for atrial fibrillation ablation: Secondary analysis of a randomized clinical trial. Journal of Cardiovascular Electrophysiology, 35(12):2372–2381. https://doi.org/10.1111/jce.16440
Barcena, A.J.R., Ravi, P., Kundu, S., and Tappa, K. (2024). Emerging Biomedical and Clinical Applications of 3D-Printed Polylactic Acid-Based Devices and Delivery Systems. Bioengineering (Basel), 11(7):705. https://doi.org/10.3390/bioengineering11070705
Gottiparthy, A., Tummala, S., Yang, Z., and Kundu, S. (2024). Neurofilament light chain as a novel biomarker for diagnosis, prognostication, and recovery in cancer patients: case series. CNS Oncology, 13(1):2386233. https://doi.org/10.1080/20450907.2024
Biermann, M., Godiers, M., Kundu, S., and Jain, A.S. (2024). The Functional Lumen Imaging Probe Contractile Response Pattern is the Best Predictor of Botulinum Toxin Response in Esophagogastric Junction Outflow Obstruction. Neurogastroenterology and Motility, 36(9):e14859. https://doi.org/10.1111/nmo.14859
Dal Lago, E.A., Guimaraes de Sousa, L., Yang, Z., Bonini, F., Sawyer, M., Wang, K., Lewis, W., Kundu, S., Godoy, M., and Ferrarotto, R. (2024). Prognostic value of tumor volume doubling time in lung-metastatic adenoid cystic carcinoma. Oral Oncology, 151:106759. https://doi.org/10.1016/j.oraloncology.2024.106759
Wahid, K., Sahin, O., Kundu, S., Lin, D., Tehami, S., Fuentes, D., Gillespie, E., and Fuller, C. (2024). Associations Between Radiation Oncologist Demographic Factors and Segmentation Similarity Benchmarks: Insights From a Crowd-Sourced Challenge Using Bayesian Estimation. JCO Clinical Cancer Informatics, 8:e2300174. https://doi.org/10.1200/CCI.23.00174
Biermann, M., Hersh, M., Kline, M., Fowler, H., Calderon, L., Godiers, M., Kundu, S., and Jain, A. (2024). Functional Lumen Imaging Probe Topography Identifies Patients with Normal Acid Exposure and Esophageal Hypervigilance Amongst Proton-Pump Inhibitor Non-Responders. Surgical Endoscopy, 38(1):291–299. https://doi.org/10.1007/s00464-023-10556-2
Manuscript with Invited Revision
Zhang, Q., Li, W., Kundu, S., and Long, Q. (2024). Knowledge-guided Bayesian Biclustering Model with Denoised Networks. Biometrics.
Yao, T., and Kundu, S. (2024). Flexible Bayesian Nonparametric Product Mixtures for Multi-scale Functional Clustering. Bayesian Analysis*.
Lyu, R., Vannucci, M., and Kundu, S. (2024). Bayesian Scalar-on-Tensor Quantile Regression for Longitudinal Neuroimaging Data in Alzheimer’s Disease. Annals of Applied Statistics*.
2023
Peer-Reviewed Publications: Collaborative
Barcena, A.J., Dhal, K., Patel, P., Ravi, P., Kundu, S., and Tappa, K. (2023). Current Biomedical Applications of 3D-printed Hydrogels. Gels, 10(1):8. https://doi.org/10.3390/gels10010008
Nieto, Y., Yang, Z., Valdez, B., Bassett, R., Kundu, S., …, and Qazilbash, M. (2023). Safety and efficacy of a new high-dose chemotherapy regimen of panobinostat, gemcitabine, busulfan and melphalan for 1st or 2nd salvage autologous stem cell transplant for patients with refractory/relapsed or high-risk myeloma: Matched pair comparisons with concurrent control cohorts. American Journal of Hematology, 99(2):245–253. https://doi.org/10.1002/ajh.27168
Alkhaldi, H., Reinhardt, A., Barnett, M., Kundu, S., Hosing, C., Ramdial, J., Saini, N., Srour, S., Alousi, A., Kebriaei, P., Popat, U., Qzailbash, M., Champlin, R., Shpall, E.J., Pinnix, C., Ahmed, S., Steiner, R., Andersson, B.S., and Nieto, Y. (2023). High-Dose Chemotherapy and Autologous Stem-Cell Transplant with Consolidative Radiation Therapy for Relapsed or Refractory Primary Mediastinal B-Cell Lymphoma. Transplantation and Cellular Therapy, 29(11):690–694. https://doi.org/10.1016/j.jtct.2023.08.019
Young, A.L., Kundu, S., Tappa, K.K., Liu, H.A., and Kumar, V. (2023). Incidence of resting-state functional connectivity to secondary language areas and contralateral language areas in patients with brain tumors. Neuroradiology Journal. https://doi.org/10.1177/19714009231196471
Liang, T., Katz, M., Prakash, L., Chatterjee, D., Wang, H., Kim, M., Tzeng, C., Ikoma, N., Wolff, R., Zhao, D., Koay, E., Maitra, A., Kundu, S., and Wang, H. (2023). Comparative Analyses of the Clinicopathologic Features of Short and Long Survivors of Patients With Pancreatic Ductal Adenocarcinoma Who Received Neoadjuvant Therapy and Pancreaticoduodenectomy. Cancers, 15:3231. https://doi.org/10.3390/cancers15123231
Lauck, K., Ahmad, A.S., Nguyen, Q.D., Yang, Z., Kundu, S., and Huen, A.O. (2023). Management Strategies and Survival in Cutaneous B Cell Lymphoma: A Population Based Study. JAAD International, 13:28–29. https://doi.org/10.1016/j.jdin.2023.06.015
Yacout, H., Smith, B.L., Foster, S., Lora, M., Niles-Carnes, L.V., Zheng, Z., Kundu, S., and Cantos, V.D. (2023). PrEP Adherence and Discontinuation at a Patient-Centered PrEP Program in Atlanta, GA. Journal of the American College of Clinical Pharmacy, 6(6):576–580. https://doi.org/10.1002/jac5.1792
Tappa, K., and Kundu, S. (2023). Applications of Additive Manufacturing Technologies in healthcare sectors during Covid-19 Pandemic. American Journal of Biomedical Science and Research, 18(3). https://doi.org/10.34297/AJBSR.2023.18.002480
Drwiega, E., Rab, S., Schechter, M., Andruski, R., Kundu, S., Zheng, Z., and Patel, M. (2023). Impact of a Dedicated Outpatient Parenteral Antimicrobial Therapy Program on Peripherally Inserted Central Catheter Removal at a Large Academic Medical Center. Infectious Diseases in Clinical Practice, 31(2):e1174. https://doi.org/10.1097/IPC.0000000000001174
2022
Peer-Reviewed Publications: Collaborative
Mitchell, D., Buszek, S.M., Tran, B., Farhat, M., Goldman, J., Erickson, L., Curl, B., Liu, H., Suki, D., Ferguson, S., Kundu, S., and Chung, C. (2022). Comparison of Radiomic Feature Variability between Different MR Pulse Sequences in Brain Metastases. F1000Research, 11:892. https://doi.org/10.12688/f1000research.122871.1
Woodland, M.K., Wood, J., Anderson, B.M., Kundu, S., Lin, E., Koay, E., Odisio, B., Chung, C., Kang, H.C., Venkatesan, A.M., Yedururi, S., De, B., Lin, Y.M., Patel, A.B., and Brock, K.K. (2022). Evaluating the Performance of StyleGAN2-ADA on Medical Images. In: SASHIMI 2022, Lecture Notes in Computer Science, vol 13570. Springer, Cham. https://doi.org/10.1007/978-3-031-16980-9_14
Singh, S., Roszik, J., Saini, N., Singh, V.K., Bavisi, K., Wang, Z., Vien, L.T., Yang, Z., Kundu, S., Davis, R.E., Bover, L., Diab, A., Neelapu, S.S., Overwijk, W.W., Rai, K., and Singh, M. (2022). B Cells Are Required to Generate Optimal Anti-Melanoma Immunity in Response to Checkpoint Blockade. Frontiers in Immunology, 13:794684. https://doi.org/10.3389/fimmu.2022.794684
Godwin, L., Zheng, Z., Kundu, S., Cousins, R., Mullinax, B.J., Ko, Y., Little, K., Smith, A., Quyyumi, A., Goyal, A., Pearson, T., Moncayo, V., and Mitchell, A.J. (2022). Serial Myocardial Perfusion Imaging in Kidney Transplant Candidates: Risk Factors Associated with New-Onset Perfusion Abnormalities. The American Journal of Cardiology, 174:84–88. https://doi.org/10.1016/j.amjcard.2022.03.030
Jarrett, S.A., Lo, K.B., Body, C.B.B., Kim, J.J., Zheng, Z., Kundu, S., Huang, E., Basu, A., Flynn, M., Dietz-Lindo, K.A., Shahnavaz, N., and Christie, J. (2022). Nausea, Vomiting and Dyspepsia Following Solid Organ Abdominal Transplant. Cureus, 14(4):e24274. https://doi.org/10.7759/cureus.24274
Calderon, L.F., Kline, M., Hersh, M., Shah, K.P., Kundu, S., Tkaczuk, A., McColloch, N., and Jain, A. (2022). The Upper Esophageal Sphincter Distensibility Index Measured Using Functional Lumen Imaging Probe Identifies Defective Barrier Function of the Upper Esophageal Sphincter. Journal of Neurogastroenterology and Motility, 28(3):463–473. https://doi.org/10.5056/jnm21197
2021
Peer-Reviewed Publications: Collaborative
Krishnamurthy, L.C., Krishnamurthy, V., Rodriguez, A.D., McGregor, K.M., Champion, G.N., Hortman, K., Roberts, S.R., Harnish, S.M., Belagaje, S.R., Benjamin, M.L., Gopinath, K., Rosenbek, J.C., McCouch, N., Kundu, S., and Crosson, B.A. (2021). Not all lesioned tissue is equal: A new look at chronic stroke with Tissue Integrity Gradation via T2w/T1w Ratio (TIGR). Frontiers in Neuroscience, 15. https://doi.org/10.3389/fnins.2021.665707
Aldredge, A., Roth, G., Vaidya, A., Duarte, A.P., Kundu, S., Zheng, Z., Smith, B., Lora, M., Gruen, J., Sheth, A., Sales, J., and Cantos, V.D. (2021). Preexposure prophylaxis care continuum among transgender women at a patient-centered preexposure prophylaxis program in Atlanta, Georgia. AIDS, 35(3):524–526. https://doi.org/10.1097/QAD.0000000000002788
Anderson, A.M., Kundu, S., Tang, B., Vaida, F., Okwuegbuna, O., McClernon, D., Cherner, M., Cookson, D., Crescini, M., Grant, I., Ellis, R.J., and Letendre, S.L. (2021). Cerebrospinal fluid CXCL10 is associated with the presence of low level CSF HIV during suppressive antiretroviral therapy. Journal of Neuroimmunology, 353:577493. https://doi.org/10.1016/j.neuroim.2021.577493
2020
Peer-Reviewed Publications: Collaborative
Beret, A., Lai, L., Xu, Y., Zheng, Z., Kundu, S., Lennox, J., Waldrop-Valverde, D., Franklin, D., Letendre, S., and Anderson, A. (2020). Distinct cellular immune properties in cerebrospinal fluid are associated with cognition in HIV-infected individuals initiating antiretroviral therapy. Journal of Neuroimmunology, 344:577246. https://doi.org/10.1016/j.jneuroim.2020.577246
Lyles, R.H., Cunningham, S.A., Kundu, S., Bassat, Q., Mandomando, I., Sacoor, C., Akelo, V., Onyango, D., Zielinski-Gutierrez, E., and Taylor, A.W. (2020). Extrapolating sparse gold standard cause of death designations to characterize broader catchment areas. Epidemiologic Methods, 9(1). https://doi.org/10.1515/em-2019-0031
Krishnamurthy, V., Krishnamurthy, L.C., Drucker, J.H., Kundu, S., Ji, B., Hortman, K., Roberts, S.R., Mammino, K., Tran, S.M., Gopinath, K., McGregor, K.M., Rodriguez, A.D., Qiu, D., Crosson, B., and Nocera, J.R. (2020). Correcting Task fMRI Signals for Variability in Baseline CBF Improves BOLD–Behavior Relationships: A Feasibility Study in an Aging Model. Frontiers in Neuroscience, 14:336. https://doi.org/10.3389/fnins.2020.00336
Hsu, D., Chokshi, F.H., Hudgins, P.A., Kundu, S., Beitler, J.J., Patel, M.R., and Aiken, A.H. (2020). Predictive Value of First Posttreatment Imaging Using Standardized Reporting in Head and Neck Cancer. Otolaryngology - Head and Neck Surgery, 41(6):1070–1075. https://doi.org/10.3174/ajnr.A6589
2019
Peer-Reviewed Publications: Collaborative
- Sule, P., Tilvawala, R., Mustapha, T., Hassounah, H., Noormohamed, A., Kundu, S., Graviss, E., Walkup, G., Kong, Y., and Cirillo, J. (2019). Rapid Tuberculosis Diagnosis Using Reporter Enzyme Fluorescence (REF). Journal of Clinical Microbiology, 57(12):e01462-19. https://doi.org/10.1128/JCM.01462-19
2018
Peer-Reviewed Publications: Collaborative
- Hanna, T.N., Kundu, S., Singh, K., Horny, M., Wood, D., Prater, A., and Duszak, R. Jr. (2018). Emergency department imaging superusers. Emergency Radiology, 26(2):161–168. https://doi.org/10.1007/s10140-018-1659-y
2016
Peer-Reviewed Publications: Collaborative
- Chokshi, F.H., Kang, J., Kundu, S., and Castillo, M. (2016). Bibliometric Analysis of Manuscript Title Characteristics Associated With Higher Citation Numbers: A Comparison of Three Major Radiology Journals, AJNR, AJR, and Radiology. Current Problems in Diagnostic Radiology, 45(6):356–360. https://doi.org/10.1067/j.cpradiol.2016.03.002